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BaseInfo

ncRNA ID novel_zma_miR13466
Species Zea mays
Class miRNA
Genome position Chr1:64299067-64299115 [+]
Reference genome RefGen_v4
Source SRR5451005
Length 24
Mature sequence(if miRNA) 26 - UGCACCAGGCUGGACUCCGGUGAA - 49
Stem-loop(if miRNA) --       CU       --     C
  CACCGGA  GUCCGGU  GGUGU C
  |||||||  |||||||  ||||| G
  GUGGCCU  CAGGUCG  CCACG G
AA       --       GA     U
Stem-loop sequence CACCGGACUGUCCGGUGGUGUCCGGUGCACCAGGCUGGACUCCGGUGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001175715.1
ncRNA:24   AAGUGGCCUCAGGUCGGACCACGU   1
  ||||||||||*|||||||||*|||
targets:764   UUCACCGGAGACCAGCCUGGCGCA   787

2.5 Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA NA coding protein psRNATarget
BT066013.2
ncRNA:24   AAGUGGCCUCAGGUCGGACCACGU   1
  ||||||||||*|||||||||*|||
targets:764   UUCACCGGAGACCAGCCUGGCGCA   787

2.5 Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds NA coding protein psRNATarget