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BaseInfo

ncRNA ID osa-miRf10943-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - GCCACAUCAGCGAAACCGUCC - NA
Stem-loop(if miRNA) U          AG            C             A  AGA  A      GACAGGUGGGCCCCACUUU
 GGUUUUGGAG  CGGUUUUGCUGA GUGGCGCCUACGU GG   GG GUCACU                   A
 ||||||||||  |||||||||||| ||||||||||||| ||   || ||||||
 CCAAAACUUC  GCCAAAGCGACU CACCGCGGAUGCA CC   AG GAUUAG                   U
A          CU            A             -  -GU  -      UAGUUUAUUUAAUUUUUGU
Stem-loop sequence UGGUUUUGGAGAGCGGUUUUGCUGACGUGGCGCCUACGUAGGAGAGGAGUCACUGACAGGUGGGCCCCACUUUAUUGUUUUUAAUUUAUUUGAUGAUUAGGAUGCCACGUAGGCGCCACAUCAGCGAAACCGUCCUUCAAAACCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI404260.1
ncRNA:21   CCUGCCAAAGCGACUACACCG   1
  ||==|||||||||||||||||
targets:82   GGGUGGUUUCGCUGAUGUGGC   102

2.0 Sequence 2385 from Patent EP2074227 NA coding protein psRNATarget
LQ236390.1
ncRNA:21   CCUGCCAAAGCGACUACACCG   1
  ||==|||||||||||||||||
targets:82   GGGUGGUUUCGCUGAUGUGGC   102

2.0 Sequence 2385 from Patent EP2985353 NA coding protein psRNATarget
JB164721.1
ncRNA:21   CCUGCCAAAGCGACUACACCG   1
  ||==|||||||||||||||||
targets:82   GGGUGGUUUCGCUGAUGUGGC   102

2.0 Sequence 2385 from Patent EP2559767 NA coding protein psRNATarget
AK110280.1
ncRNA:21   CCUGCCAAAGCGACUACACCG   1
  |||=||||||*||||||||||
targets:1890   GGAUGGUUUCACUGAUGUGGC   1910

2.5 Oryza sativa Japonica Group cDNA clone:002-163-E03, full insert sequence NA coding protein psRNATarget
HI403917.1
ncRNA:21   CCUGCCAAAGCGACUACACCG   1
  |**=|||||||||||||||||
targets:8   GCCUGGUUUCGCUGAUGUGGC   28

2.0 Sequence 2042 from Patent EP2074227 NA coding protein psRNATarget
LQ236047.1
ncRNA:21   CCUGCCAAAGCGACUACACCG   1
  |**=|||||||||||||||||
targets:8   GCCUGGUUUCGCUGAUGUGGC   28

2.0 Sequence 2042 from Patent EP2985353 NA coding protein psRNATarget
JB164378.1
ncRNA:21   CCUGCCAAAGCGACUACACCG   1
  |**=|||||||||||||||||
targets:8   GCCUGGUUUCGCUGAUGUGGC   28

2.0 Sequence 2042 from Patent EP2559767 NA coding protein psRNATarget