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BaseInfo

ncRNA ID novel_zma_miR13451
Species Zea mays
Class miRNA
Genome position Chr1:256821146-256821245 [-]
Reference genome RefGen_v4
Source SRR5451005
Length 20
Mature sequence(if miRNA) 81 - ACGGAGUGGUAGUGGGGGUA - 100
Stem-loop(if miRNA) --A      G   -    G    -----      ---A -   ----   --     A
   CGGAGU GUA GUGG GGUA     CGCGCG    G GGU    GAG  GUCGA G
   |||||| ||| |||| ||||     ||||||    | |||    |||  |||||
   GCUUCA CGU CACC CCGU     GCGCGC    C CCA    UUC  UAGCU G
GCA      G   U    A    AAAAA      GAUG A   ACAA   AU     U
Stem-loop sequence ACGGAGUGGUAGUGGGGGUACGCGCGAGGGUGAGGUCGAAGGUUCGAUUACUUAACAACCACGUAGCGCGCGAAAAAUGCCACCACUUGCGACUUCGACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008680840.2
ncRNA:20   AUGGGGGUGAUGGUGAGGCA   1
  *|||*||||*||||||||||
targets:562   CACCACCACCACCACUCCGU   581

2.5 PREDICTED: Zea mays nuclear transcription factor Y subunit B-2 (LOC103654015), mRNA NA coding protein psRNATarget