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BaseInfo

ncRNA ID novel_zma_miR13441
Species Zea mays
Class miRNA
Genome position Chr3:66024927-66024975 [-]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 1 - UGGUGCUUCGGGCUGUGACGGGCU - 24
Stem-loop(if miRNA) ---   GU   U   G U   GU A
   CUG  GCA GCU G GGC  C U
   |||  ||| ||| | |||  | G
   GGC  UGU CGG C UCG  G G
UCG   AG   -   G U   UG U
Stem-loop sequence CUGGUGCAUGCUGGUGGCGUCAUGGUGGUGCUUCGGGCUGUGACGGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008655036.2
ncRNA:24   UCGGGCAGUGUCGGGCUUCGUGGU   1
  |||||||||||||||*||||||||
targets:1018   AGCCCGUCACAGCCCAAAGCACCA   1041

1.5 PREDICTED: Zea mays translation initiation factor IF-2-like (LOC103633313), transcript variant X1, mRNA NA coding protein psRNATarget