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BaseInfo

ncRNA ID novel_zma_miR13439
Species Zea mays
Class miRNA
Genome position Chr1:217442492-217442582 [+]
Reference genome RefGen_v4
Source SRR5451005
Length 24
Mature sequence(if miRNA) 1 - UUUAUAACAAAUCGUAGGAAAUAA - 24
Stem-loop(if miRNA) --       C            --AUAAAUAACUU  GAGAGGCAA
  UUUAUAA AAAUCGUAGGAA             CC         C
  ||||||| ||||||||||||             ||         U
  AAAUAUU UUUGGCAUCCUU             UG         G
GA       U            CAAUACAAAUAAA  AUCUCCAUG
Stem-loop sequence UUUAUAACAAAUCGUAGGAAAUAAAUAACUUCCGAGAGGCAACUGGUACCUCUAGUAAAUAAACAUAACUUCCUACGGUUUUUUAUAAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU949881.1
ncRNA:24   AAUAAAGGAUGCUAAACAAUAUUU   1
  ||||||||||||=|||||||||||
targets:1209   UUAUUUCCUACGGUUUGUUAUAAA   1232

1.5 Zea mays clone 450754 mRNA sequence NA coding protein psRNATarget