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BaseInfo

ncRNA ID	novel_zma_miR13433
Species	Zea mays
Class	miRNA
Genome position	Chr5:206796269-206796315 [-]
Reference genome	RefGen_v4
Source	SRR1583942
Length	22
Mature sequence(if miRNA)	1 - GCCGACUAGCCCAUGUUGGGAC - 22
Stem-loop(if miRNA)	--A              CUC        CCAAUAUGGGUUGG   CGGCA    ||||||||||||||   ||||U    GGUUGUACCCGAUC   GCCGC CAG              --A
Stem-loop sequence	ACCAAUAUGGGUUGGCUCCGGCAUCGCCGACUAGCCCAUGUUGGGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008645619.2	ncRNA:22   CAGGGUUGUACCCGAUCAGCCG   1   ***|||||*|||||*||||||| targets:707   AGGCCAACCUGGGCGAGUCGGC   728 Target Full Sequence	2.5	PREDICTED: Zea mays vacuolar cation/proton exchanger 2 (LOC100285751), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001158641.1	ncRNA:22   CAGGGUUGUACCCGAUCAGCCG   1   ***|||||*|||||*||||||| targets:713   AGGCCAACCUGGGCGAGUCGGC   734 Target Full Sequence	2.5	Zea mays vacuolar cation/proton exchanger 2 (LOC100285751), mRNA	NA	coding protein	psRNATarget
EU973718.1	ncRNA:22   CAGGGUUGUACCCGAUCAGCCG   1   ***|||||*|||||*||||||| targets:713   AGGCCAACCUGGGCGAGUCGGC   734 Target Full Sequence	2.5	Zea mays clone 407357 vacuolar cation/proton exchanger 2 mRNA, complete cds	NA	coding protein	psRNATarget