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BaseInfo

ncRNA ID	novel_zma_miR13422
Species	Zea mays
Class	miRNA
Genome position	Chr9:104338489-104338578 [-]
Reference genome	RefGen_v4
Source	SRR5451005
Length	24
Mature sequence(if miRNA)	67 - AACCGGAGGGGAUUGAAGGGGCUA - 90
Stem-loop(if miRNA)	--                                 C      CAA   AACCGGAGGGGAUUGAAGGGGCUAAAAUCUCCU UUUAUU   U   ||||||||||||||||||||||||||||||||| ||||||   UUGGCCUCCCCUAACUUCCCUGAUUUUAGAGGA AAAUAA   U UU                                 A      AUU
Stem-loop sequence	AACCGGAGGGGAUUGAAGGGGCUAAAAUCUCCUCUUUAUUCAAUUUUAAAUAAAAAGGAGAUUUUAGUCCCUUCAAUCCCCUCCGGUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654495.2	ncRNA:24   AUCGGGGAAGUUAGGGGAGGCCAA   1   |||||||||||||||||||||||| targets:1113   UAGCCCCUUCAAUCCCCUCCGGUU   1136 Target Full Sequence	0.0	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
XM_020539411.1	ncRNA:24   AUCGGGGAAGUUAGGGGAGGCCAA   1   ||||||||*||||||||||||||* targets:3500   UAGCCCCUCCAAUCCCCUCCGGUA   3523 Target Full Sequence	2.0	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020539397.1	ncRNA:24   AUCGGGGAAGUUAGGGGAGGCCAA   1   ||||||||*||||||||||||||* targets:3535   UAGCCCCUCCAAUCCCCUCCGGUA   3558 Target Full Sequence	2.0	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008667867.1	ncRNA:24   AUCGGGGAAGUUAGGGGAGGCCAA   1   ||*|||||*||||||||||||||* targets:1031   UAACCCCUCCAAUCCCCUCCGGUA   1054 Target Full Sequence	2.0	PREDICTED: Zea mays 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (LOC103644703), mRNA	NA	coding protein	psRNATarget
EU973567.1	ncRNA:24   AUC-------GGGGAAGUUAGGGGAGGCCAA   1   |||-------||||*|||||||||||||||* targets:76   UAGUUCAUUUCCCCCUCAAUCCCCUCCGGUC   106 Target Full Sequence	2.0	Zea mays clone 401029 mRNA sequence	NA	coding protein	psRNATarget