ncRNA ID | novel_zma_miR13417 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:144679561-144679623 [-] |
Reference genome | RefGen_v4 |
Source | SRR5451005;SRR2089702;SRR2089703 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AAGAGAUUAUAGGAGUGCGGGUU - 23 |
Stem-loop(if miRNA) |
---  U     UUUA     A    - -A         CC UACUU    UAUAA CUCU C  UAUUAU    || |||||    ||||| |||| |  |||||A    GG GUGAG    AUAUU GAGA G  AUGAUG UUG  C     ---G     A    A AC      |
Stem-loop sequence | CCUUACUUUUUAUAUAAACUCUCAUAUUAUAGUAGUACAGAAGAGAUUAUAGGAGUGCGGGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S78780.1 |
|
1.5 | (gamma-zeinA)=opaque2 modifier {5' region} [Zea mays=maize, Tuxpeno CMS 450, mRNA Partial, 1889 nt] | NA | coding protein | psRNATarget |