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BaseInfo

ncRNA ID novel_zma_miR13386
Species Zea mays
Class miRNA
Genome position Chr7:147301935-147302027 [-]
Reference genome RefGen_v4
Source SRR5451005;SRR5451006
Length 22
Mature sequence(if miRNA) 1 - UUCCUGGAACGGCACCCAUCGC - 22
Stem-loop(if miRNA) --C    A    -    C    --     -GCCA     G    CAGA
   AUGG UGUC UUCC GGAA  GAAUU     GGAAU CCAC    A
   |||| |||| |||| ||||  |||||     ||||| ||||    A
   UACC ACGG AAGG CCUU  UUUAG     UCUUA GGUG    G
CGC    C    C    U    AG     AUACA     A    AAGA
Stem-loop sequence CAUGGAUGUCUUCCCGGAAGAAUUGCCAGGAAUGCCACCAGAAAGAGAAGUGGAAUUCUACAUAGAUUUGAUUCCUGGAACGGCACCCAUCGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT061292.1
ncRNA:22   CGCUACCCACGGCAAGGUCCUU   1
  **|||||*|||||||*||||||
targets:867   AAGAUGGAUGCCGUUGCAGGAA   888

2.5 Zea mays full-length cDNA clone ZM_BFb0131M12 mRNA, complete cds NA coding protein psRNATarget
BT061352.1
ncRNA:22   CGCUACCCACGGCAAGGUCCUU   1
  **|||||*|||||||*||||||
targets:2127   AAGAUGGAUGCCGUUGCAGGAA   2148

2.5 Zea mays full-length cDNA clone ZM_BFb0138C15 mRNA, complete cds NA coding protein psRNATarget
NM_001174311.1
ncRNA:22   CGCUACCCACGGCAAGGUCCUU   1
  **|||||*|||||||*||||||
targets:2127   AAGAUGGAUGCCGUUGCAGGAA   2148

2.5 Zea mays putative DUF593 domain containing family protein (LOC100381475), mRNA NA coding protein psRNATarget