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BaseInfo

ncRNA ID	novel_zma_miR13383
Species	Zea mays
Class	miRNA
Genome position	Chr7:146993951-146994057 [+]
Reference genome	RefGen_v4
Source	SRR5451005
Length	23
Mature sequence(if miRNA)	85 - GGGCUUGGGCUCGGCGACGGCGU - 107
Stem-loop(if miRNA)	-G  G -          -G   A G  G   UUGGGCUCGGGGACGGCGCGGCGU   GC G CGUUGGGCUC  GGG C GU ACG                        G   || | ||||||||||  ||| | || |||                        G   CG C GCGGCUCGGG  CGG G UU CGC                        C UG  G A          UU   - -  -   AGCGGCAGAGGCUCGACCCGCGGG
Stem-loop sequence	GGCGGCGUUGGGCUCGGGGACGGUGACGUUGGGCUCGGGGACGGCGCGGCGUGGCGGGCGCCCAGCUCGGAGACGGCGACGCUUGGGCUUGGGCUCGGCGACGGCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI406408.1	ncRNA:23   UGCGGCAGCGGCUCGGGUUCGGG   1   |||||||||||||||||=||||| targets:38   ACGCCGUCGCCGAGCCCGAGCCC   60 Target Full Sequence	1.5	Sequence 4533 from Patent EP2074227	NA	coding protein	psRNATarget
JB166869.1	ncRNA:23   UGCGGCAGCGGCUCGGGUUCGGG   1   |||||||||||||||||=||||| targets:38   ACGCCGUCGCCGAGCCCGAGCCC   60 Target Full Sequence	1.5	Sequence 4533 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238538.1	ncRNA:23   UGCGGCAGCGGCUCGGGUUCGGG   1   |||||||||||||||||=||||| targets:38   ACGCCGUCGCCGAGCCCGAGCCC   60 Target Full Sequence	1.5	Sequence 4533 from Patent EP2985353	NA	coding protein	psRNATarget
XM_020552126.1	ncRNA:23   UGCGGCAGCGGCUCGGGUUCG-GG   1   |||||||||||||||||||||-|| targets:614   ACGCCGUCGCCGAGCCCAAGCGCC   637 Target Full Sequence	3.0	PREDICTED: Zea mays vegetative cell wall protein gp1-like (LOC109945775), mRNA	NA	coding protein	psRNATarget
XM_008654540.2	ncRNA:23   UGCGGCAGCGGCUCGGGUUCGGG   1   *|||||||||||||||||*|||| targets:459   CCGCCGUCGCCGAGCCCACGCCC   481 Target Full Sequence	1.5	PREDICTED: Zea mays protease Do-like 8, chloroplastic (LOC103632808), mRNA	NA	coding protein	psRNATarget
NM_001350282.1	ncRNA:23   UGCGGCAGCGGCUCGGGUUCGGG   1   *|||||*|||||||||||*|||| targets:321   CCGCCGCCGCCGAGCCCACGCCC   343 Target Full Sequence	2.5	Zea mays uncharacterized LOC100279259 (LOC100279259), mRNA	NA	coding protein	psRNATarget
BT053919.1	ncRNA:23   UGCGGCAGCGGCUCGGGUUCGGG   1   *|||||*|||||||||||*|||| targets:271   CCGCCGCCGCCGAGCCCACGCCC   293 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0048E07 mRNA, complete cds	NA	coding protein	psRNATarget