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BaseInfo

ncRNA ID novel_zma_miR13372
Species Zea mays
Class miRNA
Genome position Chr6:40982814-40982863 [-]
Reference genome RefGen_v4
Source SRR5451005
Length 24
Mature sequence(if miRNA) 27 - UUUUGCGUGGCACUCGGCAAAGAA - 50
Stem-loop(if miRNA) --    G  U         C    A
  UUUU CG GGCACUCGG AAAG A
  |||| || ||||||||| |||| C
  AAAA GC CCGUGAGCC UUUC U
AA    A  -         A    U
Stem-loop sequence UUUUGCGUGGCACUCGGCAAAGAACUUCUUUACCGAGUGCCCGAAAAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT042352.1
ncRNA:24   AAGAAACGGCUCACGGUGCGUUUU   1
  *|||||||||||||||||||||||
targets:1263   CUCUUUGCCGAGUGCCACGCAAAA   1286

0.0 Zea mays full-length cDNA clone ZM_BFb0207J05 mRNA, complete cds NA coding protein psRNATarget
NM_001148473.2
ncRNA:24   AAGAAACGGCUCACGGUGCGUUUU   1
  *|||||||||||||||||||||||
targets:1313   CUCUUUGCCGAGUGCCACGCAAAA   1336

0.0 Zea mays Protein CHLORORESPIRATORY REDUCTION 6 chloroplastic (si707021b11), mRNA NA coding protein psRNATarget