Search result

BaseInfo

ncRNA ID	novel_zma_miR13371
Species	Zea mays
Class	miRNA
Genome position	Chr6:64867711-64867772 [-]
Reference genome	RefGen_v4
Source	SRR5451005
Length	24
Mature sequence(if miRNA)	1 - CCGUAGACUAGGAAGAACGGCAUG - 24
Stem-loop(if miRNA)	--A     -A    A          CAAGACA  C    GCCGU  UUCC GGUCUGUGGG       GC U    |||||  |||| ||||||||||       ||    CGGCA  AAGG UCAGAUGCCC       CG C GUA     AG    A          -------  G
Stem-loop sequence	AGCCGUAUUCCAGGUCUGUGGGCAAGACAGCCUCGGCCCCGUAGACUAGGAAGAACGGCAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008648412.1	ncRNA:24   GUACGGCAAGAAGGAUCAGAUGCC   1   |||||||||||||||*|||||||| targets:126   CAUGCCGUUCUUCCUCGUCUACGG   149 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103628154 (LOC103628154), mRNA	NA	coding protein	psRNATarget
BT039096.1	ncRNA:24   GUACGGCAAGAAGGAUCAGAUGCC   1   *||*|||||||||||=|||||||| targets:739   GAUCCCGUUCUUCCUGGUCUACGG   762 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0370K19 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008671383.2	ncRNA:24   GUACGGCAAGAAGGAUCAGAUGCC   1   *||*|||||||||||=|||||||| targets:945   GAUCCCGUUCUUCCUGGUCUACGG   968 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103646679 (LOC103646679), transcript variant X1, mRNA	NA	coding protein	psRNATarget