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BaseInfo

ncRNA ID novel_zma_miR13369
Species Zea mays
Class miRNA
Genome position Chr6:101451984-101452066 [-]
Reference genome RefGen_v4
Source SRR5451005
Length 24
Mature sequence(if miRNA) 1 - UCGGCAAAGGCCUGGAUUCCGGUA - 24
Stem-loop(if miRNA) --        G C      -GA        C  CAAAAAGCA
  CCGGAAUC C GGCUUU   CGAGUGCC GA         C
  |||||||| | ||||||   |||||||| ||         U
  GGCCUUAG G CCGGAA   GCUCACGG CU         C
AU        - U      ACG        U  UCUAAACAG
Stem-loop sequence CCGGAAUCGCCGGCUUUGACGAGUGCCCGACAAAAAGCACUCGACAAAUCUUCUGGCACUCGGCAAAGGCCUGGAUUCCGGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008658185.2
ncRNA:24   AUGGCCUUAGGUCCGGAAACGGCU   1
  ||=||*|||||=||||||||||||
targets:1554   UAUCGAAAUCCGGGCCUUUGCCGA   1577

2.5 PREDICTED: Zea mays putative F-box/LRR-repeat protein At3g58880 (LOC103635804), mRNA NA coding protein psRNATarget