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BaseInfo

ncRNA ID	novel_zma_miR13351
Species	Zea mays
Class	miRNA
Genome position	Chr3:202169355-202169444 [-]
Reference genome	RefGen_v4
Source	SRR1997866
Length	24
Mature sequence(if miRNA)	67 - CACAACAUGGAGUAGACAAGCAUU - 90
Stem-loop(if miRNA)	--C    -       U          --UUU    -U   CUAUA  A    ACAA CAUGGAG AGACAAGCAU     AUGC  UGA     CC C    |||| ||||||| ||||||||||     ||||  |||     ||    UGUU GUAUUUC UUUGUUCGUA     UGUG  ACU     GG G UCC    A       -          UUCUC    UU   -AAAA  A
Stem-loop sequence	CACAACAUGGAGUAGACAAGCAUUUUAUGCUUGACUAUACCACGAGGAAAAUCAUUGUGUCUCUUAUGCUUGUUUCUUUAUGAUUGUCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ089491.1	ncRNA:24   UUACGAACAGAUGAGGUACAACAC   1   ||*|||||*||||||||*|||||| targets:34   AACGCUUGCCUACUCCACGUUGUG   57 Target Full Sequence	2.5	TSA: Zea mays contig25137, mRNA sequence	NA	coding protein	psRNATarget
NM_001175687.1	ncRNA:24   UUACGAACAGAUGAGGUACAACAC   1   ||*|||||*||||||||*|||||| targets:33   AACGCUUGCCUACUCCACGUUGUG   56 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA	NA	coding protein	psRNATarget
BT065921.2	ncRNA:24   UUACGAACAGAUGAGGUACAACAC   1   ||*|||||*||||||||*|||||| targets:33   AACGCUUGCCUACUCCACGUUGUG   56 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds	NA	coding protein	psRNATarget
EU940974.1	ncRNA:24   UUACGAACAGAUGAGGUACAACAC   1   ||*|||||*||||||||*|||||| targets:2068   AACGCUUGCCUACUCCACGUUGUG   2091 Target Full Sequence	2.5	Zea mays clone 1225259 mRNA sequence	NA	coding protein	psRNATarget
NM_001165868.1	ncRNA:24   UUACGAACAGAUGAGGUACAACAC   1   ||--||||*||||||||*|||||| targets:25   AA--CUUGCCUACUCCACGUUGUG   46 Target Full Sequence	2.5	Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA	NA	coding protein	psRNATarget
BT061141.2	ncRNA:24   UUACGAACAGAUGAGGUACAACAC   1   ||--||||*||||||||*|||||| targets:25   AA--CUUGCCUACUCCACGUUGUG   46 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176621.1	ncRNA:24   UUACGAACAGAUGAGGUACAACAC   1   ||**||||*||||||||*|||||| targets:23   AACACUUGCCUACUCCACGUUGUG   46 Target Full Sequence	2.5	Zea mays uncharacterized LOC100384010 (LOC100384010), mRNA	NA	coding protein	psRNATarget
BT068871.2	ncRNA:24   UUACGAACAGAUGAGGUACAACAC   1   ||**||||*||||||||*|||||| targets:23   AACACUUGCCUACUCCACGUUGUG   46 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0146G02 mRNA, complete cds	NA	coding protein	psRNATarget