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BaseInfo

ncRNA ID	novel_zma_miR13340
Species	Zea mays
Class	miRNA
Genome position	Chr10:22309031-22309114 [-]
Reference genome	RefGen_v4
Source	SRR5451005
Length	24
Mature sequence(if miRNA)	1 - AAAAAGUACUCGGCAAAGACGGUU - 24
Stem-loop(if miRNA)	CU   UU              ----    UA            C   GCU  UCUUUGUCGAGUGC    UCUC  GCACUCGGCAAA C   |||  ||||||||||||||    ||||  ||||||||||||   UGG  AGAAACGGCUCAUG    AGAG  CGUGGGCCGUUU A -U   -C              AAAA    CC            C
Stem-loop sequence	CUGCUUUUCUUUGUCGAGUGCUCUCUAGCACUCGGCAAACCACUUUGCCGGGUGCCCGAGAAAAAGUACUCGGCAAAGACGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ239383.1	ncRNA:24   UUGGCAGAAACGGCUCAUGAAAAA   1   |=||*||||||||||||||||||| targets:30   AGCCUUCUUUGCCGAGUACUUUUU   53 Target Full Sequence	0.0	Sequence 5378 from Patent EP2985353	NA	coding protein	psRNATarget
JB167714.1	ncRNA:24   UUGGCAGAAACGGCUCAUGAAAAA   1   |=||*||||||||||||||||||| targets:30   AGCCUUCUUUGCCGAGUACUUUUU   53 Target Full Sequence	0.0	Sequence 5378 from Patent EP2559767	NA	coding protein	psRNATarget
HI407253.1	ncRNA:24   UUGGCAGAAACGGCUCAUGAAAAA   1   |=||*||||||||||||||||||| targets:30   AGCCUUCUUUGCCGAGUACUUUUU   53 Target Full Sequence	0.0	Sequence 5378 from Patent EP2074227	NA	coding protein	psRNATarget
EU974507.1	ncRNA:24   UUGGC--AGAAACGGCUCAUGAAAAA   1   |||*|--||||||||||||||||||| targets:441   AACAGCUUCUUUGCCGAGUACUUUUU   466 Target Full Sequence	2.5	Zea mays clone 451014 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget