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BaseInfo

ncRNA ID novel_zma_miR13334
Species Zea mays
Class miRNA
Genome position Chr5:174206591-174206657 [+]
Reference genome RefGen_v4
Source SRR5451005
Length 24
Mature sequence(if miRNA) 44 - UUGUAGGAUCUAGGACACCGGCUU - 67
Stem-loop(if miRNA) -- G    -   -    A   UG C   GCAAGA
  G CGGU UUC AGGU CUA  A GGU      A
  | |||| ||| |||| |||  | |||      A
  C GCCA AGG UCUA GAU  U CCG      A
UU G    C   A    G   GU A   AAGGAG
Stem-loop sequence GGCGGUUUCAGGUACUAUGACGGUGCAAGAAAAGAGGAAGCCAUUGUAGGAUCUAGGACACCGGCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542890.1
ncRNA:24   UUCGGCCACAGGAUCUAGGAUGUU   1
  |=|||||||||||||||||||||*
targets:528   AGGCCGGUGUCCUAGAUCCUACAC   551

1.0 PREDICTED: Zea mays formin-like protein 3 (LOC109939261), mRNA NA coding protein psRNATarget