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BaseInfo

ncRNA ID	novel_zma_miR13329
Species	Zea mays
Class	miRNA
Genome position	Chr4:56800351-56800482 [+]
Reference genome	RefGen_v4
Source	SRR5451005
Length	22
Mature sequence(if miRNA)	1 - UUCUUCUGAACACUGUAUGGGG - 22
Stem-loop(if miRNA)	---       GA     G     -  UAGACAU    U    GCA     G      GACCAGAG   -  GC    UUCUUCU  ACACU UAUGG GG       UGGA UUUU   CAUUA UUUUGA        GCA CU  C    |||||||  ||||| ||||| ||       |||| ||||   ||||| ||||||        ||| ||  A    GAGAAGG  UGUGG AUGCC CC       ACUU AGAG   GUAGU AGAACU        CGU GA  A CGG       -A     G     A  ------U    U    ---     G      --AUAGAA   C  AA
Stem-loop sequence	UUCUUCUGAACACUGUAUGGGGUAGACAUUGGAUUUUUGCACAUUAGUUUUGAGACCAGAGGCACUGCCAAAAAGCUGCAAGAUAUCAAGAGUGAUGGAGAUUUCAUCCACCGUAGGGUGUAGGAAGAGGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020552785.1	ncRNA:22   GGGGUAUGUCACAAGUCUUCUU   1   |||||||||||||||||||||| targets:654   CCCCAUACAGUGUUCAGAAGAA   675 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC109946082 (LOC109946082), mRNA	NA	coding protein	psRNATarget
EU975836.1	ncRNA:22   GGGGUAUGUCACAAGUCUUCUU   1   *=**|||==||||||||||||| targets:647   AUGGAUAUGGUGUUCAGAAGAA   668 Target Full Sequence	3.0	Zea mays clone 502553 mRNA sequence	NA	coding protein	psRNATarget
XM_020542630.1	ncRNA:22   GGGGUAUGUCACAAGUCUUCUU   1   *=**|||==||||||||||||| targets:654   AUGGAUAUGGUGUUCAGAAGAA   675 Target Full Sequence	3.0	PREDICTED: Zea mays protein Rf1, mitochondrial-like (LOC103635420), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020542629.1	ncRNA:22   GGGGUAUGUCACAAGUCUUCUU   1   *=**|||==||||||||||||| targets:654   AUGGAUAUGGUGUUCAGAAGAA   675 Target Full Sequence	3.0	PREDICTED: Zea mays protein Rf1, mitochondrial-like (LOC103635420), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020542631.1	ncRNA:22   GGGGUAUGUCACAAGUCUUCUU   1   *=**|||==||||||||||||| targets:1069   AUGGAUAUGGUGUUCAGAAGAA   1090 Target Full Sequence	3.0	PREDICTED: Zea mays protein Rf1, mitochondrial-like (LOC103635420), transcript variant X3, mRNA	NA	coding protein	psRNATarget