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BaseInfo

ncRNA ID novel_zma_miR13328
Species Zea mays
Class miRNA
Genome position Chr10:90137071-90137195 [+]
Reference genome RefGen_v4
Source SRR5451005
Length 24
Mature sequence(if miRNA) 102 - CUGUGUGGGUUGUCUGGGCGGCGG - 125
Stem-loop(if miRNA) --        AC   G  -          G C     UGGUGGUGGUC    -    UUUG       U
  GUCGCUCG  CAG UC CAUGGGCCCA C AGAGG           GACG CAAC    CGGCUGU G
  ||||||||  ||| || |||||||||| | |||||           |||| ||||    |||||||
  CGGCGGGU  GUU GG GUGUCUGGGU G UCUCC           CUGU GUUG    GCCGACG U
GG        CU   G  U          A A     -----------    A    CACA       G
Stem-loop sequence GUCGCUCGACCAGGUCCAUGGGCCCAGCCAGAGGUGGUGGUGGUCGACGCAACUUUGCGGCUGUUGUGGCAGCCGACACGUUGAUGUCCCUCUAGAUGGGUCUGUGUGGGUUGUCUGGGCGGCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001153348.1
ncRNA:24   GGCGGCGGGUCUGUUGGGUGUGUC   1
  ||||||||||||||||||||||||
targets:752   CCGCCGCCCAGACAACCCACACAG   775

0.0 Zea mays uncharacterized LOC100280425 (LOC100280425), mRNA NA coding protein psRNATarget
BT056208.2
ncRNA:24   GGCGGCGGGUCUGUUGGGUGUGUC   1
  ||||||||||||||||||||||||
targets:752   CCGCCGCCCAGACAACCCACACAG   775

0.0 Zea mays full-length cDNA clone ZM_BFb0079I13 mRNA, complete cds NA coding protein psRNATarget