ncRNA ID | novel_zma_miR13319 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:25022481-25022602 [-] |
Reference genome | RefGen_v4 |
Source | SRR5451005 |
Length | 24 |
Mature sequence(if miRNA) | 99 - ACCUUGCUGUGGGUGGCCUGGACC - 122 |
Stem-loop(if miRNA) |
---A     C GU G              ACUCA   --G       AC   AU     -    CC     CCUUG U  G GUGGCCUGGACCUC     GAG   GGUCCGG  CUC  CCAAG GAGU  G     ||||| |  | ||||||||||||||     |||   |||||||  |||  ||||| ||||  G     GGGAC A  U UAUCGGGCCUGGAG     CUC   CCGGGCC  GAG  GGUUC CUCG  C CCUA     - UG G              ----G   AUG       CU   --     A    UU |
Stem-loop sequence | ACCUUGCUGUGGGUGGCCUGGACCUCACUCAGAGGGGUCCGGACCUCAUCCAAGGAGUCCGGCUUGCUCACUUGGGAGUCCCGGGCCGUACUCGGAGGUCCGGGCUAUGUGUACAGGGAUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU967963.1 |
|
1.5 | Zea mays clone 311986 RNA-binding region-containing protein 1 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001157232.1 |
|
1.5 | Zea mays uncharacterized LOC100284337 (pco116717), mRNA | NA | coding protein | psRNATarget |