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BaseInfo

ncRNA ID	novel_zma_miR13315
Species	Zea mays
Class	miRNA
Genome position	Chr4:67479628-67479736 [-]
Reference genome	RefGen_v4
Source	SRR5451005;SRR5451006
Length	24
Mature sequence(if miRNA)	1 - AUGGAUUAAGGUGAAUACAUAGGC - 24
Stem-loop(if miRNA)	--         G    C          CAG G          A              CUAUGUGUU AUCU AAUCCAUGUG   U GAGUGGUUUG UGUGGAAUUUAG   ||||||||| |||| ||||||||||   | |||||||||| |||||||||||U   GAUACAUAA UGGA UUAGGUAUAC   A CUCACCAAAC ACACCUUAAAUU CG         G    A          ACA G          C
Stem-loop sequence	CUAUGUGUUGAUCUCAAUCCAUGUGCAGUGGAGUGGUUUGAUGUGGAAUUUAGUUUAAAUUCCACACCAAACCACUCGAACACAUAUGGAUUAAGGUGAAUACAUAGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235157.1	ncRNA:23   GGAUACAUAAGUGGAAUUAGGUA   1   =||-||||||=|||||||||||| targets:1   UCU-UGUAUUUACCUUAAUCCAU   22 Target Full Sequence	1.5	Sequence 1152 from Patent EP2985353	NA	coding protein	psRNATarget
JB163488.1	ncRNA:23   GGAUACAUAAGUGGAAUUAGGUA   1   =||-||||||=|||||||||||| targets:1   UCU-UGUAUUUACCUUAAUCCAU   22 Target Full Sequence	1.5	Sequence 1152 from Patent EP2559767	NA	coding protein	psRNATarget
HI403027.1	ncRNA:23   GGAUACAUAAGUGGAAUUAGGUA   1   =||-||||||=|||||||||||| targets:1   UCU-UGUAUUUACCUUAAUCCAU   22 Target Full Sequence	1.5	Sequence 1152 from Patent EP2074227	NA	coding protein	psRNATarget
EU942746.1	ncRNA:24   CGGAUACAUAAGUGGAAUUAGGUA   1   *=||-|||||||||||*||||||| targets:337   CUCU-UGUAUUCACCUCAAUCCAU   359 Target Full Sequence	1.5	Zea mays clone 1533321 mRNA sequence	NA	coding protein	psRNATarget
EU963469.1	ncRNA:24   CGGAUACAUAAGUGGAAUUAGGUA   1   *=||-||||||*|||||||||||* targets:964   CUCU-UGUAUUAACCUUAAUCCAC   986 Target Full Sequence	2.5	Zea mays clone 263014 mRNA sequence	NA	coding protein	psRNATarget
LQ239362.1	ncRNA:24   CGGAUACAUAAGUGGAAUUAGGUA   1   *=||-||||||*|||||||||||* targets:14   CUCU-UGUAUUAACCUUAAUCCAC   36 Target Full Sequence	2.5	Sequence 5357 from Patent EP2985353	NA	coding protein	psRNATarget
HI407232.1	ncRNA:24   CGGAUACAUAAGUGGAAUUAGGUA   1   *=||-||||||*|||||||||||* targets:14   CUCU-UGUAUUAACCUUAAUCCAC   36 Target Full Sequence	2.5	Sequence 5357 from Patent EP2074227	NA	coding protein	psRNATarget
JB167693.1	ncRNA:24   CGGAUACAUAAGUGGAAUUAGGUA   1   *=||-||||||*|||||||||||* targets:14   CUCU-UGUAUUAACCUUAAUCCAC   36 Target Full Sequence	2.5	Sequence 5357 from Patent EP2559767	NA	coding protein	psRNATarget