ncRNA ID | novel_zma_miR13312 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:76101998-76102069 [+] |
Reference genome | RefGen_v4 |
Source | SRR5451005 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AAACACAAGGGCAUAUAGAGAC - 22 |
Stem-loop(if miRNA) |
--        GGG    U            A        AAACACAA   CAUA AGAGACUUUAAC AGUCCA   ||||||||   |||| |||||||||||| |||||C   UUUGUGUU   GUGU UCUUUGAAGUUG UCAGGU AG        ACA    -            A      |
Stem-loop sequence | AAACACAAGGGCAUAUAGAGACUUUAACAAGUCCACUGGACUAGUUGAAGUUUCUUGUGACAUUGUGUUUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020538479.1 |
|
2.5 | PREDICTED: Zea mays TP53-regulating kinase (LOC100502223), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
BT062113.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0215N14 mRNA, complete cds | NA | coding protein | psRNATarget |