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BaseInfo

ncRNA ID	novel_zma_miR13311
Species	Zea mays
Class	miRNA
Genome position	Chr4:101901978-101902035 [-]
Reference genome	RefGen_v4
Source	SRR5451005
Length	23
Mature sequence(if miRNA)	36 - AGGGAGGCGGUUAGGGUUUGGGA - 58
Stem-loop(if miRNA)	--A   AG             G  AGGGU    GGG  GCGGUUAGGGUUU GG     U    |||  ||||||||||||| ||    CCC  CGUUAAUCUCAAA CC     A CAA   GG             G  GGGUA
Stem-loop sequence	AGGGAGGCGGUUAGGGUUUGGGAGGGUUAAUGGGCCGAAACUCUAAUUGCGGCCCAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU965848.1	ncRNA:23   AG-GGUUUGGGAUUGGCGGAGGGA   1   ||-|||||||||||=||||||||| targets:19   UCACCAAACCCUAAUCGCCUCCCU   42 Target Full Sequence	1.5	Zea mays clone 289347 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008661706.1	ncRNA:23   AG-GGUUUGGGAUUGGCGGAGGGA   1   ||-|||||||||||=||||||||| targets:508   UCACCAAACCCUAAUCGCCUCCCU   531 Target Full Sequence	1.5	PREDICTED: Zea mays trihelix transcription factor ASIL1 (LOC100276948), mRNA	NA	coding protein	psRNATarget
EU969008.1	ncRNA:23   AGGGUUUGGGAUUGGCGGAGGGA   1   **||||||||||=|||||||||| targets:24   CACCAAACCCUAGCCGCCUCCCU   46 Target Full Sequence	1.5	Zea mays clone 325548 mRNA sequence	NA	coding protein	psRNATarget
EU959937.1	ncRNA:23   AGGGUUUGGGAUUGGCGGAGGGA   1   **||||||||||=|||||||||| targets:248   CACCAAACCCUAGCCGCCUCCCU   270 Target Full Sequence	1.5	Zea mays clone 220734 mRNA sequence	NA	coding protein	psRNATarget
NM_001154332.2	ncRNA:23   AGGGUUUGGGAUUGGCGGAGGGA   1   *|||||||||||||||||*|||* targets:79   ACCCAAACCCUAACCGCCGCCCC   101 Target Full Sequence	2.5	Zea mays Rho GTPase activator (IDP182), mRNA	NA	coding protein	psRNATarget
EU956627.1	ncRNA:23   AGGGUUUGGGAUUGGCGGAGGGA   1   *|||||||||||||||||*|||* targets:80   ACCCAAACCCUAACCGCCGCCCC   102 Target Full Sequence	2.5	Zea mays clone 1568433 rho GTPase activator mRNA, complete cds	NA	coding protein	psRNATarget