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BaseInfo

ncRNA ID novel_zma_miR13308
Species Zea mays
Class miRNA
Genome position Chr4:125139534-125139696 [-]
Reference genome RefGen_v4
Source SRR5451005;SRR5451006
Length 24
Mature sequence(if miRNA) 140 - AGGAGACUGUAGGAAGUUAGCAUG - 163
Stem-loop(if miRNA) --   A A                  UG        U     GA   GG  -G            -------G      UUGA    A
  AGG G CUGUAGGAAGUUAGCAUG  CAGCUAAC UCCUA  GGC  CC  UAGGAAGUUAGC        GCUCGU    CCGC C
  ||| | ||||||||||||||||||  |||||||| |||||  |||  ||  ||||||||||||        ||||||    ||||
  UCC C GGCAUCCUUCAAUCGUAC  GUCGAUUG AGGAU  CCG  GG  AUCCUUCAAUCG        CGAGUA    GGCG C
UC   G C                  GU        C     -G   GA  AG            AAAGUCAA      ----    C
Stem-loop sequence AGGAGACUGUAGGAAGUUAGCAUGUGCAGCUAACUUCCUAGAGGCGGCCGUAGGAAGUUAGCGGCUCGUUUGACCGCACCCGCGGAUGAGCAACUGAAAGCUAACUUCCUAGAGGAGGCCGUAGGACGUUAGCUGUGCAUGCUAACUUCCUACGGCCGCCUCU