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BaseInfo

ncRNA ID novel_zma_miR13305
Species Zea mays
Class miRNA
Genome position Chr4:155060239-155060304 [-]
Reference genome RefGen_v4
Source SRR5451005
Length 24
Mature sequence(if miRNA) 43 - CUCUCUGGUCAGGCUCGGACGGUC - 66
Stem-loop(if miRNA) -C      -      - U     G    GC    
  UCUCUG GUCAGG C CGGAC GUCC  GGCCU
  |||||| |||||| | ||||| ||||  ||||G
  GGGGAC CGGUCC G GUCUG CAGG  CCGGG
UC      G      A C     G    --    
Stem-loop sequence CUCUCUGGUCAGGCUCGGACGGUCCGCGGCCUGGGGCCGGACGGUCUGCGACCUGGCGCAGGGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ096610.1
ncRNA:24   CUGGCAGGCUCGGACUGGUCUCUC   1
  |||||||||*|=||||||||||||
targets:25   GACCGUCCGCGUCUGACCAGAGAG   48

2.5 TSA: Zea mays contig32265, mRNA sequence NA coding protein psRNATarget