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BaseInfo

ncRNA ID	novel_zma_miR13300
Species	Zea mays
Class	miRNA
Genome position	Chr4:234174650-234174727 [-]
Reference genome	RefGen_v4
Source	SRR5451005;SRR5451006
Length	22
Mature sequence(if miRNA)	1 - CCAAGCUGUGCUCGAUGAUGGU - 22
Stem-loop(if miRNA)	CUCGUCAGA    UUG  U   CU U    CUUC   C  -   G          CAUC   CG AGC  C GCUU    GGC UC ACC A          ||||   || |||  | ||||    ||| || |||          GUAG   GC UCG  G CGAA    CCG AG UGG A -------UG    -UA  -   -U U    ---C   U  C   G
Stem-loop sequence	CUCGUCAGACAUCUUGCGUAGCCUCUGCUUCUUCGGCCUCACCGAAGGGUCGAUGCCCAAGCUGUGCUCGAUGAUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU940885.1	ncRNA:22   UGGUAGUAGCUCGUGUCGAACC   1   *||||*||=||||||||||||| targets:428   UCCAUAAUUGAGCACAGCUUGG   449 Target Full Sequence	2.0	Zea mays clone 1166220 mRNA sequence	NA	coding protein	psRNATarget
XM_008682646.1	ncRNA:22   UGGUAGUAGCUCGUGUCGAACC   1   =|||||||*|||||||*||||| targets:820   GCCAUCAUGGAGCACAUCUUGG   841 Target Full Sequence	2.5	PREDICTED: Zea mays phenylalanine ammonia-lyase-like (LOC103655990), mRNA	NA	coding protein	psRNATarget
XM_020542909.1	ncRNA:22   UGGUAGUAGCUCGUGUCGAACC   1   =|||||||*|||||||*||||| targets:850   GCCAUCAUGGAGCACAUCUUGG   871 Target Full Sequence	2.5	PREDICTED: Zea mays nascent polypeptide-associated complex subunit alpha, muscle-specific form-like (LOC103636788), mRNA	NA	coding protein	psRNATarget
EU958443.1	ncRNA:22   UGGUAGUAGCUCGUGUCGAACC   1   =|||||||*|||||||*||||| targets:412   GCCAUCAUGGAGCACAUCUUGG   433 Target Full Sequence	2.5	Zea mays clone 1691270 mRNA sequence	NA	coding protein	psRNATarget
NM_001174615.1	ncRNA:22   UGGUAGUAGCUCGUGUCGAACC   1   =|||||||*|||||||*||||| targets:1056   GCCAUCAUGGAGCACAUCUUGG   1077 Target Full Sequence	2.5	Zea mays phenylalanine ammonia-lyase (LOC100381820), mRNA	NA	coding protein	psRNATarget
BT062346.1	ncRNA:22   UGGUAGUAGCUCGUGUCGAACC   1   =|||||||*|||||||*||||| targets:1056   GCCAUCAUGGAGCACAUCUUGG   1077 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0284A16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008647730.2	ncRNA:22   UGGUAGUAGCUCGUGUCGAACC   1   =|||||||*|||||||*||||| targets:1090   GCCAUCAUGGAGCACAUCUUGG   1111 Target Full Sequence	2.5	PREDICTED: Zea mays phenylalanine ammonia-lyase (LOC103627433), mRNA	NA	coding protein	psRNATarget
EU957015.1	ncRNA:22   UGGUAGUAGCUCGUGUCGAACC   1   =|||||||*|||||||*||||| targets:1084   GCCAUCAUGGAGCACAUCUUGG   1105 Target Full Sequence	2.5	Zea mays clone 1580529 phenylalanine ammonia-lyase mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154450.1	ncRNA:22   UGGUAGUAGCUCGUGUCGAACC   1   =|||||||*|||||||*||||| targets:1084   GCCAUCAUGGAGCACAUCUUGG   1105 Target Full Sequence	2.5	Zea mays phenylalanine ammonia-lyase (LOC100281532), mRNA	NA	coding protein	psRNATarget
BT068983.1	ncRNA:22   UGGUAGUAGCUCGUGUCGAACC   1   =|||||||*|||||||*||||| targets:1057   GCCAUCAUGGAGCACAUCUUGG   1078 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0098J03 mRNA, complete cds	NA	coding protein	psRNATarget