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BaseInfo

ncRNA ID	novel_zma_miR13293
Species	Zea mays
Class	miRNA
Genome position	Chr10:85617893-85617948 [-]
Reference genome	RefGen_v4
Source	SRR5451005
Length	24
Mature sequence(if miRNA)	1 - ACUGAUUGUUAGCUGUGAGGUAUA - 24
Stem-loop(if miRNA)	---   CC  G              -  G    ACC  UA AGCUAAUAAUUAGU CA C    |||  || |||||||||||||| || U    UGG  GU UCGAUUGUUAGUCA GU A AUA   -A  G              A  A
Stem-loop sequence	ACCCCUAGAGCUAAUAAUUAGUCAGCUAAUGAACUGAUUGUUAGCUGUGAGGUAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT035603.1	ncRNA:24   AU--AUGGAGUGUCGAUUGUUAGUCA   1   ||--||||||=|||||||||||=||| targets:696   UAGCUACCUCGCAGCUAACAAUUAGU   721 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0071K11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020544205.1	ncRNA:24   AU--AUGGAGUGUCGAUUGUUAGUCA   1   ||--||*|||||||||||||||=||| targets:764   UAGCUAACUCACAGCUAACAAUUAGU   789 Target Full Sequence	1.5	PREDICTED: Zea mays probable tRNA N6-adenosine threonylcarbamoyltransferase (LOC103639367), mRNA	NA	coding protein	psRNATarget
XM_020544398.1	ncRNA:24   AU--AUGGAGUGUCGAUUGUUAGUCA   1   ||--||*|||||||||||||||=||| targets:1331   UAGCUAACUCACAGCUAACAAUUAGU   1356 Target Full Sequence	1.5	PREDICTED: Zea mays tRNA N6-adenosine threonylcarbamoyltransferase-like (LOC109939365), mRNA	NA	coding protein	psRNATarget
XM_020551910.1	ncRNA:24   AU--AUGGAGUGUCGAUUGUUAGUCA   1   ||--||*|||||||||||||||=||| targets:797   UAGCUAACUCACAGCUAACAAUUAGU   822 Target Full Sequence	1.5	PREDICTED: Zea mays probable tRNA N6-adenosine threonylcarbamoyltransferase (LOC103641568), mRNA	NA	coding protein	psRNATarget
AY104238.1	ncRNA:24   AU--AUGGAGUGUCGAUUGUUAGUCA   1   ||--||*|||=|||||||||||=||| targets:215   UAACUAACUCGCAGCUAACAAUUAGU   240 Target Full Sequence	2.5	Zea mays PCO120536 mRNA sequence	NA	coding protein	psRNATarget
XM_008674565.2	ncRNA:24   AU--AUGGAGUGUCGAUUGUUAGUCA   1   ||--||*|||=|||||||||||=||| targets:876   UAACUAACUCGCAGCUAACAAUUAGU   901 Target Full Sequence	2.5	PREDICTED: Zea mays RING finger and CHY zinc finger domain-containing protein 1 (LOC100280509), transcript variant X1, mRNA	NA	coding protein	psRNATarget