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BaseInfo

ncRNA ID novel_zma_miR13275
Species Zea mays
Class miRNA
Genome position Chr10:113314283-113314388 [-]
Reference genome RefGen_v4
Source SRR5451005
Length 24
Mature sequence(if miRNA) 83 - ACCAUGAUAGGAGACAAGCUAGAA - 106
Stem-loop(if miRNA) --      ---       ACA        -----AU    AUAGGAGUUGUAAUGCUU
  ACCAUG   AUAGGAG   AGCUAGAA       GCUU                  A
  ||||||   |||||||   ||||||||       ||||
  UGGUAC   UAUCCUU   UUGAUCUU       ACUG                  U
GA      AUA       --C        CGUUUGU    UACUCUUAGUUUUCGUAG
Stem-loop sequence ACCAUGAUAGGAGACAAGCUAGAAAUGCUUAUAGGAGUUGUAAUGCUUAUGAUGCUUUUGAUUCUCAUGUCAUGUUUGCUUCUAGUUCUUCCUAUAUACAUGGUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT062207.1
ncRNA:24   AAGAUCGAACAGAGGAUAGUACCA   1
  *||--|||||||||=||||||||*
targets:1369   GUC--GCUUGUCUCUUAUCAUGGA   1390

2.5 Zea mays full-length cDNA clone ZM_BFb0227C23 mRNA, complete cds NA coding protein psRNATarget