ncRNA ID | novel_zma_miR13265 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:119897906-119898072 [-] |
Reference genome | RefGen_v4 |
Source | SRR5451005 |
Length | 24 |
Mature sequence(if miRNA) | 144 - AGAGGAGGCCGUAGAAAGUUAGCA - 167 |
Stem-loop(if miRNA) |
--     A                    U               GA   GG  -G  A  A      -------G   C     ACCG   AGAGG GGCCGUAGAAAGUUAGCAUG GCAGCUAACUUCCUA  GGC  UC  UA GA GUUAGC        GCU GUUUG    C   ||||| |||||||||||||||||||| |||||||||||||||  |||  ||  || || ||||||        ||| |||||   UCUCC UCGGCAUCUUUCAAUCGUAC CGUCGAUUGAAGGAU  CCG  AG  AU CU CAAUCG        CGA UAGAC    A GA     G                    C               -G   GA  AG  C  C      AAAGUCAA   C     GCCC |
Stem-loop sequence | AGAGGAGGCCGUAGAAAGUUAGCAUGUGCAGCUAACUUCCUAGAGGCGGUCGUAAGAAGUUAGCGGCUCGUUUGACCGCACCCGCAGAUCAGCAACUGAAAGCUAACCUCCUAGAGAAGGCCGUAGGAAGUUAGCUGCCCAUGCUAACUUUCUACGGCUGCCUCUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT086229.2 |
|
0.0 | Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT086229.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds | NA | coding protein | psRNATarget |