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BaseInfo

ncRNA ID	novel_zma_miR13244
Species	Zea mays
Class	miRNA
Genome position	Chr2:145506894-145507001 [-]
Reference genome	RefGen_v4
Source	SRR5451005
Length	24
Mature sequence(if miRNA)	85 - GGGGUGGAUUGAGGGGGAUUGGAG - 108
Stem-loop(if miRNA)	--                                                   U   GGGGUGGAUUGAGGGGGAUUGGAGUGGAUUAAAUGCCCUCCUAUUCAAAUU G   |||||||||||||||||||||||||||||||||||||||||||||||||||   CCCCACCUAACUCCCCCUAACCUCACCUAAUUUACGGGAGGAUAAGUUUAA A AU                                                   A
Stem-loop sequence	GGGGUGGAUUGAGGGGGAUUGGAGUGGAUUAAAUGCCCUCCUAUUCAAAUUUGAAAAUUUGAAUAGGAGGGCAUUUAAUCCACUCCAAUCCCCCUCAAUCCACCCCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020552749.1	ncRNA:24   GAGGUUAGGGGGAGUUAGGUGGGG   1   |||||||||||||||||||||||| targets:3277   CUCCAAUCCCCCUCAAUCCACCCC   3300 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103654236 (LOC103654236), mRNA	NA	coding protein	psRNATarget
XM_008661613.2	ncRNA:24   GAGGUUAGGGGGAGUUAGGUGGGG   1   ||||||||||=||||||||||||| targets:3045   CUCCAAUCCCUCUCAAUCCACCCC   3068 Target Full Sequence	1.0	PREDICTED: Zea mays two-component response regulator ORR25 (LOC103638799), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008661611.2	ncRNA:24   GAGGUUAGGGGGAGUUAGGUGGGG   1   ||||||||||=||||||||||||| targets:3050   CUCCAAUCCCUCUCAAUCCACCCC   3073 Target Full Sequence	1.0	PREDICTED: Zea mays two-component response regulator ORR25 (LOC103638799), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT067503.1	ncRNA:24   GAGGUUAGGGGGAGUUAGGUGGGG   1   ||||||||||||||||||||||=| targets:1598   CUCCAAUCCCCCUCAAUCCACCUC   1621 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0066C23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176181.1	ncRNA:24   GAGGUUAGGGGGAGUUAGGUGGGG   1   ||||||||||||||||||||||=| targets:1598   CUCCAAUCCCCCUCAAUCCACCUC   1621 Target Full Sequence	1.5	Zea mays uncharacterized LOC100383533 (LOC100383533), mRNA	NA	coding protein	psRNATarget
XM_020552750.1	ncRNA:24   GAGGUUAGGGGGAGUUAGGUGGGG   1   *||=||||||=|||||||||||=| targets:143   AUCUAAUCCCUCUCAAUCCACCUC   166 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103654238 (LOC103654238), mRNA	NA	coding protein	psRNATarget
BT017648.1	ncRNA:24   GAGGUUAGGGGGAGUUAGGUGGGG   1   |||-|||===|||||||||||||| targets:217   CUC-AAUUUUCCUCAAUCCACCCC   239 Target Full Sequence	3.0	Zea mays clone EL01N0439D04.c mRNA sequence	NA	coding protein	psRNATarget