ncRNA ID | novel_zma_miR13241 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:169266802-169266890 [+] |
Reference genome | RefGen_v4 |
Source | SRR1997866 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAUGGAUUAAAUGAGAUUAGAAA - 24 |
Stem-loop(if miRNA) |
--AUA      A    A    A  ----AAA     AAAAA     UU      UGGAUU AAUG GAUU GA       AAAUC     UAAGU  A      |||||| |||| |||| ||       |||||     |||||  G      ACCUAA UUAC CUAA CU       UUUAG     GUUCG  U AGUAC      C    A    C  ACUCAAA     ----G     UU |
Stem-loop sequence | AUAUGGAUUAAAUGAGAUUAGAAAAAAAUCAAAAAUAAGUUUAGUUUGCUUGGGAUUUAAACUCAUCCAAUCACAUUCAAUCCACAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008672266.2 |
|
1.5 | PREDICTED: Zea mays hypothetical protein (LOC103647750), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008672265.2 |
|
1.5 | PREDICTED: Zea mays hypothetical protein (LOC103647750), transcript variant X1, mRNA | NA | coding protein | psRNATarget |