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BaseInfo

ncRNA ID novel_zma_miR13239
Species Zea mays
Class miRNA
Genome position Chr2:131629706-131629904 [+]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 1 - GAUGAUCUAGGGGAUGUUUGGUUU - 24
Stem-loop(if miRNA) --   GA        A                      G          U         C         -   U      A                   
  GAU  UCUAGGGG UGUUUGGUUUCUAGGGACUAAU UUUAGUCCCU CAUUUUGUU CAUUUUAGU AUA AAAUUG UAAAUAUAGGAACUAAAAUA
  |||  |||||||| |||||||||||||||||||||| |||||||||| ||||||||| ||||||||| ||| |||||| |||||||||||||||||||G
  UUG  AGAUCCCC ACAAACCAAAGAUCCCUGAUUA AAAUCAGGGA GUAAAAUAA GUGAAAUCA UGU UUUAAU GUUUAUAUCUUUGAUUUUGA
CG   GC        C                      A          U         A         A   -      A                   
Stem-loop sequence GAUGAUCUAGGGGAUGUUUGGUUUCUAGGGACUAAUGUUUAGUCCCUUCAUUUUGUUCCAUUUUAGUAUAUAAAUUGAUAAAUAUAGGAACUAAAAUAGAGUUUUAGUUUCUAUAUUUGAUAAUUUUGUAACUAAAGUGAAAUAAAAUGUAGGGACUAAAAAUUAGUCCCUAGAAACCAAACACCCCCUAGACGGUUGC