ncRNA ID | novel_zma_miR13239 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:131629706-131629904 [+] |
Reference genome | RefGen_v4 |
Source | SRR5451004 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAUGAUCUAGGGGAUGUUUGGUUU - 24 |
Stem-loop(if miRNA) |
--   GA        A                      G          U         C         -   U      A                      GAU  UCUAGGGG UGUUUGGUUUCUAGGGACUAAU UUUAGUCCCU CAUUUUGUU CAUUUUAGU AUA AAAUUG UAAAUAUAGGAACUAAAAUA   |||  |||||||| |||||||||||||||||||||| |||||||||| ||||||||| ||||||||| ||| |||||| |||||||||||||||||||G   UUG  AGAUCCCC ACAAACCAAAGAUCCCUGAUUA AAAUCAGGGA GUAAAAUAA GUGAAAUCA UGU UUUAAU GUUUAUAUCUUUGAUUUUGA CG   GC        C                      A          U         A         A   -      A                    |
Stem-loop sequence | GAUGAUCUAGGGGAUGUUUGGUUUCUAGGGACUAAUGUUUAGUCCCUUCAUUUUGUUCCAUUUUAGUAUAUAAAUUGAUAAAUAUAGGAACUAAAAUAGAGUUUUAGUUUCUAUAUUUGAUAAUUUUGUAACUAAAGUGAAAUAAAAUGUAGGGACUAAAAAUUAGUCCCUAGAAACCAAACACCCCCUAGACGGUUGC |