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BaseInfo

ncRNA ID novel_zma_miR13235
Species Zea mays
Class miRNA
Genome position Chr2:71988982-71989027 [+]
Reference genome RefGen_v4
Source SRR5451004
Length 22
Mature sequence(if miRNA) 25 - CGAGAUUUGUAAGAAAAGGGUA - 46
Stem-loop(if miRNA) --    C  AA  G        U
  CCCU UU  UA AAAUCUCG C
  |||| ||  || ||||||||
  GGGA AA  AU UUUAGAGC C
AU    A  GA  G        U
Stem-loop sequence CCCUCUUAAUAGAAAUCUCGUCCUCGAGAUUUGUAAGAAAAGGGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008676431.2
ncRNA:22   AU-GGGAAAAGAAUGUUUAGAGC   1
  ||-||||||||||||||||||=|
targets:546   UAUCCCUUUUCUUACAAAUCUUG   568

1.5 PREDICTED: Zea mays uncharacterized LOC103650841 (LOC103650841), mRNA NA coding protein psRNATarget
XM_008666709.2
ncRNA:22   AUGGGAAAAGAAUGUUUAGAGC   1
  *|||=*||||||||||||||||
targets:242   AACCUCUUUCUUACAAAUCUCG   263

2.0 PREDICTED: Zea mays uncharacterized LOC103643535 (LOC103643535), mRNA NA coding protein psRNATarget