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BaseInfo

ncRNA ID novel_zma_miR13222
Species Zea mays
Class miRNA
Genome position Chr10:1390386-1390459 [+]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 1 - UCUCUCGCUUGAGGUUGGUCUGAG - 24
Stem-loop(if miRNA) --  -              GG   --  GCG      AA
  UC UCUCGCUUGAGGUU  UCU  GA   AGGAGG  C
  || ||||||||||||||  |||  ||   ||||||  A
  AG AGAGCGGGCUCCGG  GGA  CU   UCCUCU  A
AA  U              UU   GC  --A      GU
Stem-loop sequence UCUCUCGCUUGAGGUUGGUCUGAGCGAGGAGGAACAAUGUCUCCUAUCCGAGGUUGGCCUCGGGCGAGAUGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU950659.1
ncRNA:24   GAGUCUGGUUGGAGUUCGCUCUCU   1
  ||*|||=||**|||||||||||||
targets:402   CUGAGAUCAUACUCAAGCGAGAGA   425

3.0 Zea mays clone 506757 mRNA sequence NA coding protein psRNATarget