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BaseInfo

ncRNA ID novel_zma_miR13209
Species Zea mays
Class miRNA
Genome position Chr1:279834735-279834864 [-]
Reference genome RefGen_v4
Source SRR5451004;SRR2089701;SRR2089704;SRR2089706
Length 24
Mature sequence(if miRNA) 1 - CACUUUAAGGGAUCUGUUGGAGAA - 24
Stem-loop(if miRNA) --         UU     -    CACUCCUAAC     -CAU     UU     U           G
  CUCUAACAG  UCCCU AAAG          UUUUU    AGCCC  AAAAC CCCUCAUUUGU G
  |||||||||  ||||| ||||          |||||    |||||  ||||| |||||||||||
  GAGGUUGUC  AGGGA UUUC          AAAGA    UCGGG  UUUUG GGGAGUAAACA C
AA         -U     A    ACUAUAUAAC     CCCC     UU     -           U
Stem-loop sequence CUCUAACAGUUUCCCUAAAGCACUCCUAACUUUUUCAUAGCCCUUAAAACUCCCUCAUUUGUGGCUACAAAUGAGGGGUUUUUUGGGCUCCCCAGAAACAAUAUAUCACUUUAAGGGAUCUGUUGGAGAA