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BaseInfo

ncRNA ID novel_zma_miR13206
Species Zea mays
Class miRNA
Genome position Chr1:297076295-297076435 [-]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 1 - AUGUAAGGGGCUGUAAAAGAUGGU - 24
Stem-loop(if miRNA) --       -         C    A     GC  CU  U   UAU     -AAA    --A     -UU  UA
  CAUUUUU ACAGCCCCU ACAU CACUA  UG  GG CCA   AAAUA    GAAA   ACAAA   AC  A
  ||||||| ||||||||| |||| |||||  ||  || |||   |||||    ||||   |||||   ||
  GUAGAAA UGUCGGGGA UGUA GUGGU  AC  CC GGU   UUUAU    UUUU   UGUUU   UG  A
UG       A         A    G     GA  UU  U   UUU     CUAG    AAA     UAU  UA
Stem-loop sequence CAUUUUUACAGCCCCUCACAUACACUAGCUGCUGGUCCAUAUAAAUAAAAGAAAAACAAAUUACUAAAAUGUUAUUUUGUAAAUUUUGAUCUAUUUUUUUGGUCCUUCAAGUGGUGGAUGUAAGGGGCUGUAAAAGAUGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008674327.2
ncRNA:24   UGGUAGAAAAUGUCGGGGAAUGUA   1
  *|||*|||||=||||||||*||||
targets:1510   CCCAACUUUUGCAGCCCCUCACAU   1533

2.5 PREDICTED: Zea mays uncharacterized LOC100274883 (LOC100274883), transcript variant X1, mRNA NA coding protein psRNATarget