ncRNA ID | novel_zma_miR13206 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:297076295-297076435 [-] |
Reference genome | RefGen_v4 |
Source | SRR5451004 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGUAAGGGGCUGUAAAAGAUGGU - 24 |
Stem-loop(if miRNA) |
--       -         C    A     GC  CU  U   UAU     -AAA    --A     -UU  UA   CAUUUUU ACAGCCCCU ACAU CACUA  UG  GG CCA   AAAUA    GAAA   ACAAA   AC  A   ||||||| ||||||||| |||| |||||  ||  || |||   |||||    ||||   |||||   ||   GUAGAAA UGUCGGGGA UGUA GUGGU  AC  CC GGU   UUUAU    UUUU   UGUUU   UG  A UG       A         A    G     GA  UU  U   UUU     CUAG    AAA     UAU  UA |
Stem-loop sequence | CAUUUUUACAGCCCCUCACAUACACUAGCUGCUGGUCCAUAUAAAUAAAAGAAAAACAAAUUACUAAAAUGUUAUUUUGUAAAUUUUGAUCUAUUUUUUUGGUCCUUCAAGUGGUGGAUGUAAGGGGCUGUAAAAGAUGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008674327.2 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC100274883 (LOC100274883), transcript variant X1, mRNA | NA | coding protein | psRNATarget |