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BaseInfo

ncRNA ID novel_zma_miR13190
Species Zea mays
Class miRNA
Genome position Chr1:188253950-188254115 [+]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 143 - UCUUGUCUGUAGGAGGAGAAACGG - 166
Stem-loop(if miRNA) --      G     U       -UGCA       U  -AU   -UCUCU     ---- U    UU  C    -AA   GC    A  
  GUUUCU CUUCU UAGACGA     AAUUCUU GA   UCC      UAGUG    C CAGC  GA UCUA   AGG  GGCU ACG
  |||||| ||||| |||||||     ||||||| ||   |||      |||||    | ||||  || ||||   |||  |||| ||A
  CAAAGA GAGGA GUCUGUU     UUGAGAG CU   AGG      GUCAU    G GUCG  CU AGGU   UUC  UCGA UGG
GG      G     U       CUUAG       -  CAU   UCAUUC     UUCA U    -U  -    CAG   AU    A  
Stem-loop sequence GUUUCUGCUUCUUUAGACGAUGCAAAUUCUUUGAAUUCCUCUCUUAGUGCUCAGCUUGACUCUAAAAGGGCGGCUAACGAGGUAAGCUUACUUGACUGGAUCUGCUGUGACUUUACUGCUUACUGGAUACUCGAGAGUUGAUUCUUGUCUGUAGGAGGAGAAACGG