ncRNA ID | novel_zma_miR13190 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:188253950-188254115 [+] |
Reference genome | RefGen_v4 |
Source | SRR5451004 |
Length | 24 |
Mature sequence(if miRNA) | 143 - UCUUGUCUGUAGGAGGAGAAACGG - 166 |
Stem-loop(if miRNA) |
--      G     U       -UGCA       U  -AU   -UCUCU     ---- U    UU  C    -AA   GC    A     GUUUCU CUUCU UAGACGA     AAUUCUU GA   UCC      UAGUG    C CAGC  GA UCUA   AGG  GGCU ACG   |||||| ||||| |||||||     ||||||| ||   |||      |||||    | ||||  || ||||   |||  |||| ||A   CAAAGA GAGGA GUCUGUU     UUGAGAG CU   AGG      GUCAU    G GUCG  CU AGGU   UUC  UCGA UGG GG      G     U       CUUAG       -  CAU   UCAUUC     UUCA U    -U  -    CAG   AU    A   |
Stem-loop sequence | GUUUCUGCUUCUUUAGACGAUGCAAAUUCUUUGAAUUCCUCUCUUAGUGCUCAGCUUGACUCUAAAAGGGCGGCUAACGAGGUAAGCUUACUUGACUGGAUCUGCUGUGACUUUACUGCUUACUGGAUACUCGAGAGUUGAUUCUUGUCUGUAGGAGGAGAAACGG |