Search result

BaseInfo

ncRNA ID	novel_zma_miR13187
Species	Zea mays
Class	miRNA
Genome position	Chr1:181912142-181912206 [+]
Reference genome	RefGen_v4
Source	SRR5451004;SRR5451006
Length	24
Mature sequence(if miRNA)	1 - GGGUUUGGACAGGAAACUAGGCAC - 24
Stem-loop(if miRNA)	--         CA  -    UA   A  -  -   C   GGGUUUGGA  GG AAAC  GGC CG GC GGG U   |||||||||  || ||||  ||| || || |||   CCCGAAUCU  CC UUUG  CCG GC CG CCC A UG         --  A    -C   -  A  G   G
Stem-loop sequence	GGGUUUGGACAGGAAACUAGGCACGGCGGGCUAGCCCGGCACGGCCCGUUUACCUCUAAGCCCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001176752.1	ncRNA:24   CACGGAUCAAAGGACAGGUUUGGG   1   |||||||||||||||||||||||| targets:641   GUGCCUAGUUUCCUGUCCAAACCC   664 Target Full Sequence	0.0	Zea mays uncharacterized LOC100384175 (LOC100384175), mRNA	NA	coding protein	psRNATarget
BT069394.1	ncRNA:24   CACGGAUCAAAGGACAGGUUUGGG   1   |||||||||||||||||||||||| targets:641   GUGCCUAGUUUCCUGUCCAAACCC   664 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0124O18 mRNA, complete cds	NA	coding protein	psRNATarget
EU943720.1	ncRNA:24   CACGGAUCAAAGGACAGGUUUGGG   1   ||||||||||||||||||||=||| targets:552   GUGCCUAGUUUCCUGUCCAAGCCC   575 Target Full Sequence	1.5	Zea mays clone 1681864 mRNA sequence	NA	coding protein	psRNATarget
EU976811.1	ncRNA:24   CACGGAUCAAAGGACAGGUUUGGG   1   ||||||||||||||||||||=||| targets:908   GUGCCUAGUUUCCUGUCCAAGCCC   931 Target Full Sequence	1.5	Zea mays clone 990772 mRNA sequence	NA	coding protein	psRNATarget
EU942142.1	ncRNA:24   CACGGAUCAAAGGACAGGUUUGGG   1   ||||||||||||||||||||=||| targets:1249   GUGCCUAGUUUCCUGUCCAAGCCC   1272 Target Full Sequence	1.5	Zea mays clone 1476731 mRNA sequence	NA	coding protein	psRNATarget