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BaseInfo

ncRNA ID	novel_zma_miR13183
Species	Zea mays
Class	miRNA
Genome position	Chr1:152413970-152414038 [+]
Reference genome	RefGen_v4
Source	SRR5451004
Length	24
Mature sequence(if miRNA)	1 - GGUCCGCGGCCAGGGACCGGACGG - 24
Stem-loop(if miRNA)	--      -          CC  ACGGUCCACAACC   GGUCCG CGGCCAGGGA  GG             U   |||||| ||||||||||  ||   CCGGGC GUCGGUCCCU  UG             G GG      A          --  GGCUCGGGACGCG
Stem-loop sequence	GGUCCGCGGCCAGGGACCGGACGGUCCACAACCUGGCGCAGGGCUCGGGUUCCCUGGCUGACGGGCCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ073491.1	ncRNA:24   GGCAGGCCAGGGACCGGCGCCUGG   1   |=||||||*|||*||||||||||| targets:81   CUGUCCGGCCCCAGGCCGCGGACC   104 Target Full Sequence	2.5	TSA: Zea mays contig09128, mRNA sequence	NA	coding protein	psRNATarget
BT067553.1	ncRNA:24   GGCAGGCCAGGGACCGGCGCCUGG   1   ||-||||||=|||||||||||||* targets:377   CC-UCCGGUUCCUGGCCGCGGACA   399 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0086O18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176196.1	ncRNA:24   GGCAGGCCAGGGACCGGCGCCUGG   1   ||-||||||=|||||||||||||* targets:377   CC-UCCGGUUCCUGGCCGCGGACA   399 Target Full Sequence	2.0	Zea mays putative auxin efflux carrier PIN10a (PIN10a), mRNA	NA	coding protein	psRNATarget
XM_020549919.1	ncRNA:24   GGCAGGCCAGGGACCGGCGCCUGG   1   ||-||||||=|||||||||||||* targets:496   CC-UCCGGUUCCUGGCCGCGGACA   518 Target Full Sequence	2.0	PREDICTED: Zea mays putative auxin efflux carrier PIN10a (PIN10a), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008683200.2	ncRNA:24   GGCAGGCCAGGGACCGGCGCCUGG   1   *|*|||*|||*||||||||||||| targets:722   ACAUCCCGUCGCUGGCCGCGGACC   745 Target Full Sequence	2.0	PREDICTED: Zea mays putative O-glycosyl hydrolase family 17 protein (LOC100273173), transcript variant X1, mRNA	NA	coding protein	psRNATarget