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BaseInfo

ncRNA ID	novel_zma_miR13182
Species	Zea mays
Class	miRNA
Genome position	Chr9:54530235-54530297 [+]
Reference genome	RefGen_v4
Source	SRR5451004
Length	24
Mature sequence(if miRNA)	1 - CAAAGCCAUCUUUGCCGAGUGCCC - 24
Stem-loop(if miRNA)	--      CA               C   GGU   CAAAGC  UCUUUGCCGAGUGCC AGU   G   ||||||  ||||||||||||||| |||   GUUUCG  AGAAACGGCUCACGG UCG   C CC      AC               -   GAG
Stem-loop sequence	CAAAGCCAUCUUUGCCGAGUGCCCAGUGGUGCGAGGCUGGCACUCGGCAAAGACAGCUUUGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU962802.1	ncRNA:24   CCCGUGAGCCGUUUCUACCGAAAC   1   |||||||||||||||=|||||||| targets:869   GGGCACUCGGCAAAGGUGGCUUUG   892 Target Full Sequence	1.5	Zea mays clone 245661 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
HI406962.1	ncRNA:24   CCCGUGAGCCGUUUCUACCGAAAC   1   ||||||||*|||||||*||||||| targets:42   GGGCACUCAGCAAAGAAGGCUUUG   65 Target Full Sequence	2.5	Sequence 5087 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239092.1	ncRNA:24   CCCGUGAGCCGUUUCUACCGAAAC   1   ||||||||*|||||||*||||||| targets:42   GGGCACUCAGCAAAGAAGGCUUUG   65 Target Full Sequence	2.5	Sequence 5087 from Patent EP2985353	NA	coding protein	psRNATarget
JB167423.1	ncRNA:24   CCCGUGAGCCGUUUCUACCGAAAC   1   ||||||||*|||||||*||||||| targets:42   GGGCACUCAGCAAAGAAGGCUUUG   65 Target Full Sequence	2.5	Sequence 5087 from Patent EP2559767	NA	coding protein	psRNATarget
EU967411.1	ncRNA:24   CCCGUGAGCCGUUUCUACCGAAAC   1   ||*||=*|*||||||||||||||| targets:517   GGUCAUGCUGCAAAGAUGGCUUUG   540 Target Full Sequence	3.0	Zea mays clone 302704 mRNA sequence	NA	coding protein	psRNATarget
EU969881.1	ncRNA:24   CCCGUGAGCCGUUUCUACCGAAAC   1   ||*||=*|*||||||||||||||| targets:1172   GGUCAUGCUGCAAAGAUGGCUUUG   1195 Target Full Sequence	3.0	Zea mays clone 336772 sad1/unc-84-like protein 2 mRNA, complete cds	NA	coding protein	psRNATarget
EU967587.1	ncRNA:24   CCCGUGAGCCGUUUCUACCGAAAC   1   ||*||=*|*||||||||||||||| targets:1171   GGUCAUGCUGCAAAGAUGGCUUUG   1194 Target Full Sequence	3.0	Zea mays clone 304631 sad1/unc-84-like protein 2 mRNA, complete cds	NA	coding protein	psRNATarget
BT055722.1	ncRNA:24   CCCGUGAGCCGUUUCUACCGAAAC   1   ||*||=*|*||||||||||||||| targets:1145   GGUCAUGCUGCAAAGAUGGCUUUG   1168 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0141L06 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153113.2	ncRNA:24   CCCGUGAGCCGUUUCUACCGAAAC   1   ||*||=*|*||||||||||||||| targets:1225   GGUCAUGCUGCAAAGAUGGCUUUG   1248 Target Full Sequence	3.0	Zea mays SUN domain protein2 (cl44325_1), mRNA	NA	coding protein	psRNATarget