Search result

BaseInfo

ncRNA ID novel_zma_miR13181
Species Zea mays
Class miRNA
Genome position Chr9:44988009-44988182 [+]
Reference genome RefGen_v4
Source SRR5451004
Length 22
Mature sequence(if miRNA) 1 - AAGUAGGAUUUUAGUAUGGCGA - 22
Stem-loop(if miRNA) --          -U  G      -------     GAUU    -  UC  --G UA  C        GC        AUAGAU     AAA   G
  AAGUAGGAUU  UA UAUGGC       GAGCC    UGUU AU  CU   U  AG UGUUAGUC  AUUGUUAG      UGAAU   UAU U
  ||||||||||  || ||||||       |||||    |||| ||  ||   |  || ||||||||  ||||||||      |||||   ||| G
  UUCGUUUUAA  GU GUAUUG       CUCGG    ACAG UG  GA   A  UC AUGAUUAG  UAACAAUC      AUUUA   AUG U
UG          UU  G      UAACUGC     ----    C  GU  AUA GC  U        GA        -GAAAU     -GG   G
Stem-loop sequence AAGUAGGAUUUUAGUAUGGCGAGCCGAUUUGUUAUUCCUGUUAAGCUGUUAGUCGCAUUGUUAGAUAGAUUGAAUAAAUAUGUGUGGUAGGAUUUAUAAAGCUAACAAUAGGAUUAGUAUCUCGAAUAAGUGGUCGACAGGCUCCGUCAAUGUUAUGGUGUUAAUUUUGCUUGU