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BaseInfo

ncRNA ID novel_zma_miR13156
Species Zea mays
Class miRNA
Genome position Chr10:66760480-66760565 [+]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 1 - AACGGUGCUGCGUCAGGGGGUUUU - 24
Stem-loop(if miRNA) --                    -              UCUUU   A
  AACGGUGCUGCGUCAGGGGG UUUUUGUAAAAUGU     GCA U
  |||||||||||||||||||| ||||||||||||||     |||
  UUGCCACGAUGCAGUCCCCC AAAAACAUUUUACA     UGU U
GG                    C              -----   C
Stem-loop sequence AACGGUGCUGCGUCAGGGGGUUUUUGUAAAAUGUUCUUUGCAAUUCUGUACAUUUUACAAAAACCCCCCUGACGUAGCACCGUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020539811.1
ncRNA:24   UUUUGGGGGACUGCGUCGUGGCAA   1
  ||||||||||||||||||||||||
targets:1656   AAAACCCCCUGACGCAGCACCGUU   1679

0.0 PREDICTED: Zea mays anthocyanidin 3-O-glucoside 6''-O-acyltransferase (LOC103631128), mRNA NA coding protein psRNATarget
XM_008681149.2
ncRNA:24   UUUUGGGGGACUGCGUCGUGGCAA   1
  |||||||||||||*||||||||||
targets:665   AAAACCCCCUGACACAGCACCGUU   688

1.5 PREDICTED: Zea mays mini zinc finger protein 1 (LOC103654311), mRNA NA coding protein psRNATarget
XM_008660409.2
ncRNA:24   UUUUGGGGGACUGCGUCGUGGCAA   1
  |||||||||||||*||||||||||
targets:1341   AAAACCCCCUGACACAGCACCGUU   1364

1.5 PREDICTED: Zea mays homeodomain-leucine zipper transcription factor TaHDZipI-1 (LOC100282963), transcript variant X1, mRNA NA coding protein psRNATarget