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BaseInfo

ncRNA ID novel_zma_miR13154
Species Zea mays
Class miRNA
Genome position Chr9:120296896-120296977 [+]
Reference genome RefGen_v4
Source SRR5451004
Length 25
Mature sequence(if miRNA) 1 - AUUCUACACUUCUGUUGGCAUCACU - 25
Stem-loop(if miRNA) --                          UAU   UA  C   U
  AUUCUACACUUCUGUUGGCAUCACUA   AGU  GG AUG A
  ||||||||||||||||||||||||||   |||  || |||
  UAAGAUGUGAAGACAACCGUAGUGAU   UCA  CC UAC A
AA                          -UC   --  -   A
Stem-loop sequence AUUCUACACUUCUGUUGGCAUCACUAUAUAGUUAGGCAUGUAAACAUCCACUCUUAGUGAUGCCAACAGAAGUGUAGAAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ079348.1
ncRNA:25   UCACUACGGUUGUCUUCACAUCUUA   1
  ||*|=||*||**|||||||||||||
targets:4   AGGGGUGGCAUGAGAAGUGUAGAAU   28

3.0 TSA: Zea mays contig14987, mRNA sequence NA coding protein psRNATarget