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BaseInfo

ncRNA ID novel_zma_miR13146
Species Zea mays
Class miRNA
Genome position Chr9:65063038-65063095 [+]
Reference genome RefGen_v4
Source SRR5451004;SRR1997866
Length 24
Mature sequence(if miRNA) 35 - CCCUAUAGACUAGAAAGAACGGCG - 58
Stem-loop(if miRNA) --    --A     A      -    -A  A
  CCGU   UUCUA GUCUAU GGGC  AG U
  ||||   ||||| |||||| ||||  || A
  GGCA   AAGAU CAGAUA CCCG  UC G
GC    AGA     -      U    GC  C
Stem-loop sequence CCGUAUUCUAAGUCUAUGGGCAAGAUAGCCUCGGCCCUAUAGACUAGAAAGAACGGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB169935.1
ncRNA:24   GCGGCAAGAAAGAUCAGAUAUCCC   1
  |*||||||||||||||||||=|||
targets:76   CACCGUUCUUUCUAGUCUAUGGGG   99

1.5 Sequence 7599 from Patent EP2559767 NA coding protein psRNATarget
LQ241604.1
ncRNA:24   GCGGCAAGAAAGAUCAGAUAUCCC   1
  |*||||||||||||||||||=|||
targets:76   CACCGUUCUUUCUAGUCUAUGGGG   99

1.5 Sequence 7599 from Patent EP2985353 NA coding protein psRNATarget
HI409474.1
ncRNA:24   GCGGCAAGAAAGAUCAGAUAUCCC   1
  |*||||||||||||||||||=|||
targets:76   CACCGUUCUUUCUAGUCUAUGGGG   99

1.5 Sequence 7599 from Patent EP2074227 NA coding protein psRNATarget