ncRNA ID | novel_zma_miR13128 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:163896112-163896260 [+] |
Reference genome | RefGen_v4 |
Source | SRR5451004;SRR5451005 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUGAAAUUGGGAAGAGGGAGCGGA - 24 |
Stem-loop(if miRNA) |
--                                               A   U        -   U    UUUUU   UUGAAAUUGGGAAGAGGGAGCGGAUCAGGAAGAGAAAAGAGAGUAAC CCC GAAUUUGG GGG AGAA     U   ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||||   AACUUUAACCCUUCUCCCUCGUCUAGUCCUUCUCUUUUCUCUCAUUG GGG CUUAAACC CUC UCUU     C CA                                               C   -        A   -    UUCUU |
Stem-loop sequence | UUGAAAUUGGGAAGAGGGAGCGGAUCAGGAAGAGAAAAGAGAGUAACACCCUGAAUUUGGGGGUAGAAUUUUUUCUUCUUUUCUCUCACCAAAUUCGGGCGUUACUCUCUUUUCUCUUCCUGAUCUGCUCCCUCUUCCCAAUUUCAAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU948499.1 |
|
0.0 | Zea mays clone 378997 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT038105.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0212B12 mRNA, complete cds | NA | coding protein | psRNATarget |