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BaseInfo

ncRNA ID osa-miRf10909-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - GGGUGAUACUUGUGAGGUAUCAGGU - NA
Stem-loop(if miRNA)           UU         A   U       G GUU     ----CACAU   AU          CA       A
AGGUAUCGGG  CUGAUACCU ACA GUAUCAU C   UCUAC         AUC  GUGAUACUUG  AGGUAUC G
||||||||||  ||||||||| ||| ||||||| |   |||||         |||  ||||||||||  |||||||
UCCAUAGUCC  GACUAUGGA UGU CAUAGUG G   AGAUG         UAG  UACUAUGGAC  UCUAUAG A
          UG         G   U       G ---     UACCAUUCU   CG          UA       U
Stem-loop sequence AGGUAUCGGGUUCUGAUACCUAACAUGUAUCAUGCGUUUCUACCACAUAUCAUGUGAUACUUGCAAGGUAUCAGAUGAUAUCUAUCAGGUAUCAUGCGAUUCUUACCAUGUAGAGGGUGAUACUUGUGAGGUAUCAGGUCCUGAUACCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK110723.1
ncRNA:25   UGGACUAUGGAGUGUUCAUAGUGGG   1
  ||*|||||||||||=||||||||||
targets:704   ACAUGAUACCUCACGAGUAUCACCC   728

1.5 Oryza sativa Japonica Group cDNA clone:002-170-E02, full insert sequence NA coding protein psRNATarget
AK242991.1
ncRNA:25   UGGACUAUGGAGUGUUCAUAGUGGG   1
  |=*|*=|||||||||||||||||**
targets:2584   AUAUUGUACCUCACAAGUAUCACAA   2608

2.5 Oryza sativa Japonica Group cDNA, clone: J090095D18, full insert sequence NA coding protein psRNATarget