ncRNA ID | osa-miRf10909-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 25 |
Mature sequence(if miRNA) | NA - GGGUGAUACUUGUGAGGUAUCAGGU - NA |
Stem-loop(if miRNA) |
          UU         A   U       G GUU     ----CACAU   AU          CA       A AGGUAUCGGG  CUGAUACCU ACA GUAUCAU C   UCUAC         AUC  GUGAUACUUG  AGGUAUC G ||||||||||  ||||||||| ||| ||||||| |   |||||         |||  ||||||||||  ||||||| UCCAUAGUCC  GACUAUGGA UGU CAUAGUG G   AGAUG         UAG  UACUAUGGAC  UCUAUAG A           UG         G   U       G ---     UACCAUUCU   CG          UA       U |
Stem-loop sequence | AGGUAUCGGGUUCUGAUACCUAACAUGUAUCAUGCGUUUCUACCACAUAUCAUGUGAUACUUGCAAGGUAUCAGAUGAUAUCUAUCAGGUAUCAUGCGAUUCUUACCAUGUAGAGGGUGAUACUUGUGAGGUAUCAGGUCCUGAUACCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK110723.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:002-170-E02, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK242991.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090095D18, full insert sequence | NA | coding protein | psRNATarget |