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BaseInfo

ncRNA ID	novel_zma_miR13116
Species	Zea mays
Class	miRNA
Genome position	Chr8:65395928-65396014 [+]
Reference genome	RefGen_v4
Source	SRR5451004
Length	21
Mature sequence(if miRNA)	1 - AGGGGAUUGGUCAGUGUAGGG - 21
Stem-loop(if miRNA)	AG    UU G  -          GG     G G     UU    G   GGGA  G UC AGUGUAGGGA  UCCUU G UUGAU  UGCU C   ||||  | || ||||||||||  ||||| | |||||  |||| G   UCCU  C AG UCACGUCCUU  GGGAA C GACUG  GCGG A UA    -U G  A          -A     - G     --    U
Stem-loop sequence	AGGGGAUUGGUCAGUGUAGGGAGGUCCUUGGGUUGAUUUUGCUGCGAUGGCGGUCAGGCAAGGGAUUCCUGCACUAGAGCUUCCUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT054688.2	ncRNA:21   GGGAUGUGACUGGUUAGGGGA   1   ||||||||||||||*|||||| targets:745   CCCUACACUGACCACUCCCCU   765 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0082P04 mRNA, complete cds	NA	coding protein	psRNATarget
BT085686.2	ncRNA:21   GGGAUGUGACUGGUUAGGGGA   1   ||||||||||||||*|||||| targets:745   CCCUACACUGACCACUCCCCU   765 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0047L20 mRNA, complete cds	NA	coding protein	psRNATarget
BT085585.2	ncRNA:21   GGGAUGUGACUGGUUAGGGGA   1   ||||||||||||||*|||||| targets:735   CCCUACACUGACCACUCCCCU   755 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0036J03 mRNA, complete cds	NA	coding protein	psRNATarget
BT055683.2	ncRNA:21   GGGAUGUGACUGGUUAGGGGA   1   ||||||||||||||*|||||| targets:685   CCCUACACUGACCACUCCCCU   705 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0112J02 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001175762.1	ncRNA:21   GGGAUGUGACUGGUUAGGGGA   1   ||||||||||||||*|||||| targets:745   CCCUACACUGACCACUCCCCU   765 Target Full Sequence	1.5	Zea mays uncharacterized LOC100383091 (LOC100383091), mRNA	NA	coding protein	psRNATarget
BT066164.2	ncRNA:21   GGGAUGUGACUGGUUAGGGGA   1   ||||||||||||||*|||||| targets:745   CCCUACACUGACCACUCCCCU   765 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0047C23 mRNA, complete cds	NA	coding protein	psRNATarget
EU940868.1	ncRNA:21   GGGAUGUGACUGGUUAGGGGA   1   ||||||||||||||*|||||| targets:1549   CCCUACACUGACCACUCCCCU   1569 Target Full Sequence	1.5	Zea mays clone 1165273 mRNA sequence	NA	coding protein	psRNATarget
BT062452.2	ncRNA:21   GGGAUGUGACUGGUUAGGGGA   1   |||*||||||||||*|||||| targets:761   CCCCACACUGACCACUCCCCU   781 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0299E23 mRNA, complete cds	NA	coding protein	psRNATarget