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BaseInfo

ncRNA ID novel_zma_miR13113
Species Zea mays
Class miRNA
Genome position Chr7:37258318-37258400 [+]
Reference genome RefGen_v4
Source SRR5451004;SRR2089707;SRR2089708
Length 24
Mature sequence(if miRNA) 60 - GCCUUAUUUUCGGCGGUUUCUGGC - 83
Stem-loop(if miRNA) --  AG              -     AAG             
  CA  AACCGCCGAAAAUA GGCCU   GCCGCCGAAAAUAG
  ||  |||||||||||||| |||||   |||||||||||||C
  GU  UUGGCGGCUUUUAU CCGGA   CGGCGGUUUUUAUU
CG  CU              U     -CA             
Stem-loop sequence CAAGAACCGCCGAAAAUAGGCCUAAGGCCGCCGAAAAUAGCUUAUUUUUGGCGGCACAGGCCUUAUUUUCGGCGGUUUCUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167665.1
ncRNA:24   CGGUCUUUGGCGGCUUUUAUUCCG   1
  ||||*||=||||||||||||||||
targets:2   GCCAAAAGCCGCCGAAAAUAAGGC   25

1.0 Sequence 5329 from Patent EP2559767 NA coding protein psRNATarget
HI407204.1
ncRNA:24   CGGUCUUUGGCGGCUUUUAUUCCG   1
  ||||*||=||||||||||||||||
targets:2   GCCAAAAGCCGCCGAAAAUAAGGC   25

1.0 Sequence 5329 from Patent EP2074227 NA coding protein psRNATarget
LQ239334.1
ncRNA:24   CGGUCUUUGGCGGCUUUUAUUCCG   1
  ||||*||=||||||||||||||||
targets:2   GCCAAAAGCCGCCGAAAAUAAGGC   25

1.0 Sequence 5329 from Patent EP2985353 NA coding protein psRNATarget