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BaseInfo

ncRNA ID	novel_zma_miR13102
Species	Zea mays
Class	miRNA
Genome position	Chr7:19655706-19655801 [+]
Reference genome	RefGen_v4
Source	SRR5451004
Length	22
Mature sequence(if miRNA)	1 - GCGUGAUGUCGUGGAUGUCGGA - 22
Stem-loop(if miRNA)	--   U  U  -C         GGAGG     C   G      G -AAG   A   GCG GA GU  GUGGAUGUC     AGCAA GGA CUUGGC G    GAC G   ||| || ||  |||||||||     ||||| ||| |||||| |    |||   UGC CU CG  CACCUGCAG     UCGUU CCU GAGCUG C    CUG C AA   -  U  UC         -----     -   -      G GAGG   U
Stem-loop sequence	GCGUGAUGUCGUGGAUGUCGGAGGAGCAACGGAGCUUGGCGGAAGGACAGCUGUCGGAGCGGUCGAGUCCUUGCUGACGUCCACCUGCUUCCGUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU951983.1	ncRNA:22   AGGCUGUAGGUGCUGUAGUGCG   1   |||||||*|||||||||||||| targets:1200   UCCGACAGCCACGACAUCACGC   1221 Target Full Sequence	1.0	Zea mays clone 1064297 mRNA sequence	NA	coding protein	psRNATarget
BT038063.1	ncRNA:22   AGGCUGUAGGUGCUGUAGUGCG   1   |||||||*|||||||||||||| targets:1506   UCCGACAGCCACGACAUCACGC   1527 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0209O09 mRNA, complete cds	NA	coding protein	psRNATarget
BT038974.1	ncRNA:22   AG--GCUGUAGGUGCUGUAGUGCG   1   ||--||||=*|||||||||||||| targets:324   UCAACGACGGCCACGACAUCACGC   347 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0345P15 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147040.1	ncRNA:22   AG--GCUGUAGGUGCUGUAGUGCG   1   ||--||||=*|||||||||||||| targets:324   UCAACGACGGCCACGACAUCACGC   347 Target Full Sequence	2.0	Zea mays Alpha carbonic anhydrase 1 chloroplastic (pco087467a), mRNA	NA	coding protein	psRNATarget
NM_001321780.1	ncRNA:22   AG--GCUGUAGGUGCUGUAGUGCG   1   ||--||||=*|||||||||||||* targets:530   UCAACGACGGCCACGACAUCACGA   553 Target Full Sequence	3.0	Zea mays Alpha carbonic anhydrase 1 chloroplastic (LOC100384165), mRNA	NA	coding protein	psRNATarget