| ncRNA ID | novel_zma_miR13082 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr1:15682119-15682283 [-] |
| Reference genome | RefGen_v4 |
| Source | SRR5451004 |
| Length | 22 |
| Mature sequence(if miRNA) | 144 - UUCGAUGGCGCACCGGACAAUC - 165 |
| Stem-loop(if miRNA) |
UUCGA ------------- CA G C CC UG CAC ACACUG U AU UGGCGCACCGGACAA UCCGGUG CACCGGACA UC GGUG CC C GUCA CCG UGG U ||||||||||||||| ||||||| ||||||||| || |||| || | |||| ||| ||| C GCCGUGUGGCCUGUU AGGCCAC GUGGCCUGU GG CCGC GG G CAGU GGU GCC U GUAAG CCUUGUCAUCUAC AC G U CC GU -UU CUUCGA U GA |
| Stem-loop sequence | UUCGAUGGCGCACCGGACAAUCCGGUGCACACCGGACAGUCCGGUGCCCCUGCCACGUCAACACUGCCGUUGGAUUCUAGCCGUUGGAGCUUCUGACUUGUGGGCCCGCCUGGGUGUCCGGUGCACACCGGACAUCUACUGUUCCUUGUCCGGUGUGCCGGAAUG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NM_001176839.1 |
|
0.0 | Zea mays uncharacterized LOC100384275 (LOC100384275), mRNA | NA | coding protein | psRNATarget | |||||||||
| BT069667.1 |
|
0.0 | Zea mays full-length cDNA clone ZM_BFb0206D24 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| EU948808.1 |
|
1.0 | Zea mays clone 385792 mRNA sequence | NA | coding protein | psRNATarget |