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BaseInfo

ncRNA ID novel_zma_miR13081
Species Zea mays
Class miRNA
Genome position Chr1:16375991-16376131 [-]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 1 - GGGGGGUGGAUAGGCAAAAACUGA - 24
Stem-loop(if miRNA) ---AGA                  CCCC    U  A        -----   ---C  -CCG  A   CUUU    GG
      UUUGCCUAUUCACCCCCC    UCUA GC ACUUUCAG     AUC    UC    AC UCA    GAGU  U
      ||||||||||||||||||    |||| || ||||||||     |||    ||    || |||    ||||
      AAACGGAUAGGUGGGGGG    AGAU CG UGAAAGUU     UAG    AG    UG AGU    CUCA  U
AGUCAA                  ----    C  C        AACCA   CCUC  ACCA  A   -AAU    GA
Stem-loop sequence AGAUUUGCCUAUUCACCCCCCCCCCUCUAUGCAACUUUCAGAUCCUCCCGACAUCACUUUGAGUGGUUAGACUCUAAUGAAGUACCAGACUCCGAUACCAAUUGAAAGUCGCCUAGAGGGGGGUGGAUAGGCAAAAACUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU952213.1
ncRNA:24   AGUCAAAAACGGAUAGGUGGGGGG   1
  ||||*|||*|||||||||||||||
targets:1212   UCAGGUUUCGCCUAUCCACCCCCC   1235

1.0 Zea mays clone 1226497 hypothetical protein mRNA, complete cds NA coding protein psRNATarget