ncRNA ID | novel_zma_miR13081 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:16375991-16376131 [-] |
Reference genome | RefGen_v4 |
Source | SRR5451004 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGGGGGUGGAUAGGCAAAAACUGA - 24 |
Stem-loop(if miRNA) |
---AGA                  CCCC    U  A        -----   ---C  -CCG  A   CUUU    GG       UUUGCCUAUUCACCCCCC    UCUA GC ACUUUCAG     AUC    UC    AC UCA    GAGU  U       ||||||||||||||||||    |||| || ||||||||     |||    ||    || |||    ||||       AAACGGAUAGGUGGGGGG    AGAU CG UGAAAGUU     UAG    AG    UG AGU    CUCA  U AGUCAA                  ----    C  C        AACCA   CCUC  ACCA  A   -AAU    GA |
Stem-loop sequence | AGAUUUGCCUAUUCACCCCCCCCCCUCUAUGCAACUUUCAGAUCCUCCCGACAUCACUUUGAGUGGUUAGACUCUAAUGAAGUACCAGACUCCGAUACCAAUUGAAAGUCGCCUAGAGGGGGGUGGAUAGGCAAAAACUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU952213.1 |
|
1.0 | Zea mays clone 1226497 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |